I can't think of any place that may help. You may have to search the net if anyone had a similar issue.
Anyhow, if you don't mind, I could run through some questions and try to troubleshoot with you.
1. How did you delete the save in Emunand?
2. After the save deletion, if you use Checkpoint to do a save back up in Emunand, does it actually produce a usable save?
3. While using HOME in OFW, after withdrawing a mon, while still in the boxes screen, did you press the + button and chose Save changes and exit?
4. After step 1 to 3, try booting the game in CFW, what message is displayed?