So a little things i've seen :
Being able to create differents storages which would group boxes (like PKSM), that way you could create different kind of storages
Being able to save (as said in my previous post) pre-config for saves used (for example, I select 3 games, I save it at a config that I can load easily)
Being able to add storages (based on my first suggestion) to that pokedex count
Being able to have a Shiny mode for "caught" (like being able to still see missing mon AND obtained shiny)
Being able to display a Shiny sprite in the Pokedex mode
Maybe being able to filter a little with Dex cuts : For example, I've put Sword / Shield saves only, and I see that it displays all Pokemon.
Edit : Also have a specific setup in mind, don't know how possible it could be done. Might if I DM you about that ?
Thanks ! Might be easier for me to explain that in French if necessary x_x
Edit 2 : Same problem occuring with handling PID Clones. I've two Shiny Kabuto (Gen 2) that shares the same data / info but are still obtained differently / at different times so for me they aren't cloens at all. I wanted to test the tool by moving both to the storage. Only one is kept. The tool flags them as copies but they aren't in fact. Same occures with the Weedle next to it