I've got an issue converting 4 Gen .PKM to 5 and 6 Gen.
When i extracted a .PKM file from Pokegen [HG Save], it said my .PKM file is encrypted.
So, i used Poké Transfer tool:
http://projectpokemon.org/forums/showthread.php?14371-Pok%E9-Transfer
Does it was made to not read encrypted .PKM [Pokegen] files or should i use other Save Editor [Which one?]?