Legit Pokémon Being flagged as hacked?

[Blackout6868]

So I have a few Problems with Pokémon I legitimately hunted being flagged as hacked for whatever odd reason 

A common Problem I have is pokemon caught in Legends Arceus massive mass outbreaks being flagged as illegal for not being able to match an encounter from origin game 

I also have a few more odd examples:

A greninja I caught in the X&Y friend safari, only iffy thing I did was level it up with hacked rare candies on a different save file than it was caught and I have a whole mess of issues.

An appletun hatched around when SWSH came out that isn't supposed to know a move or something 

A gyrados from the lake of rage with a "HT" problem???

and a floatzle from USUM ultra wormhole with similar problems.

 

again none of these are hacked or modified and most of them were caught before i even had access to a computer so any insight would be appreciated.  

[Atrius97]

HOME 3.0.0 legality is still a work in progress. See the changelog and/or github commits for PKHeX for details.

[Santi_vgc27]

I have the same problem. 

 

[theSLAYER]

3 hours ago, Santi_vgc27 said:

I have the same problem. 

It’s almost as tho you didn’t read the response to this thread. The message right above you

it’s a known issue because of.. well, read the reply above yours ><