l just tried myself and its working fine, Well HyperGTS only works for 4th Gen and ShinyGTS works for both generation depend on which you have set but make sure your .pkm files is 236 kilobyte (5th Gen Party Pokemon Files) try running 4th gen files with 5th gen mode won't work. If you need to convert your files to 5th Gen download this: http://projectpokemon.org/forums/showthread.php?14371-Pok%E9-Transfer&highlight=Poke+Transfer