Uhm. I'm not sure if this was answered or anything.
Basically, what'd I'd like to know is if I can create a file that saves my hacked pokemon. that way I don't have to redo them over and over again?
I did it for Pokemon Platinum and Soul Silver:
I created a .sav file w/ PokeSav and then used PokeGen to modify that .sav file and then save it with whatever pokemon i want. After that, all i have to do is open it up using PokeGen to see the pokemon I hacked before.
[And I'm doing this without ROMs and all that good stuff.]
And to be a little more thorough. I feel like 1 .sav file would be nicer than having a folder full of .pkmn >_> ((in case anyone wanted to tell me to do it that way ))